Browse of TCMCG006C76646 protein

CDS

Accession Number	TCMCG006C76646
gbkey	CDS
Protein Id	XP_013698063.1
Location	complement(join(46623515..46623581,46623703..46623792,46623868..46623939,46624047..46624120,46624215..46624295,46624422..46624511,46624611..46624781,46624932..46624998,46625096..46625163,46625375..46625473,46625597..46625722,46625826..46625966,46626150..46626236,46626334..46626417,46626517..46626657,46626828..46626924,46627054..46627349,46627457..46627575,46627703..46627784,46627911..46628093,46628280..46628462,46628594..46628774,46628924..46629035,46629418..46629545,46629627..46629724,46629998..46630156))
Gene	LOC106401980
GeneID	106401980
Organism	Brassica napus

Protein

Length	1031aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013842609.2
Definition	E3 ubiquitin-protein ligase UPL6-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Ubiquitin-protein ligase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K10589        [VIEW IN KEGG]
EC	2.3.2.26        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04120        [VIEW IN KEGG] map04120        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004842        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006464        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016567        [VIEW IN EMBL-EBI] GO:0016740        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019787        [VIEW IN EMBL-EBI] GO:0032446        [VIEW IN EMBL-EBI] GO:0036211        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044267        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0061630        [VIEW IN EMBL-EBI] GO:0061659        [VIEW IN EMBL-EBI] GO:0070647        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTTTTTCTCCGGCGATCCGTCGACTCGGAAGCGTGTCGATTTAGGTGGCCGGAGCACCAAGGAGGGAGATGCTCGCAGGCTTCTTGAGCAGACCAGGATGGAGCGTAATCGTCGTCTCCTGCAGAAGCAGCACAACTCCGCCGCCCTCAAAATTCAGAAATTCTTTAGAGGTAGAAGATCAATGGCCATTGAGCGCTTCAAGGTGAGGCGTGACTTCTGTGAAACCTATGGTGATAATTGCCAGAATGTCGATAGGCATTGCTTTGAGCCAGCTTCTAGTTTCCTCCCTCAGTTTCTGTTTTTCTTCAAGGCGCAAAGCTCGGGAGATTTTGTGATGCTTGTGGAGACGTGTCGTCTACTGCGACAGTTTGCGCACAGCTGTGGTGACATTCTAAGCTTTTTCTCTGGCTTGGACTACTCTACTGAGCATAATACGGTGGATTTTAGAGTAAAGAAACTTGCATTTACCTGCATCGAGGCTATACATCAGAATAGGGAACGTTTAAGGGATCAGCTCTTAGTTACTCCCGAAGAAGCTACCATTTCAACAGCTATCTTGATGGATGCGATGTCGTTGTTGCTAGATCCTAAGCTGCCTTGGGTTTGCAAAATAGTTAGCTATCTACAGAAAAGAAACATATTCAAACTGGTCCGAGAAATTGTGACTACGGCTAAGGAAGGCTCAAGAAGTCCGACTATGAACGGCAGCATCCTTTCGCTAGAAAGTGTATTGTTTCTGGTAGTACCACACGTTGGCCGTGAGCCATGTTGCTGCCCTGTTGTTGATCCACGTTGGAGTTTCTCATCTATGATCCTTACCATACCCTTTATATGGCAGCTCTTCCCAAACTTGAAAGTGGTCTTTGCTAACCCAAGTCTAAGTCAACACTACGTTCACCAGATGGCTTTATGTATCCAAAAGGATACACATGTTCTCCCAATAGATACAAACACAGAATTTCCTGGTTATGCTTGTCTTCTTGGTAATACATTGGAAATTGCAAACGTGGTCTTGTCACAGCCTGAATGTTCATTGGACATGGCAATTGACATTGCATCAGTTGCAACTTTCTTATTGGAGACACTTCCTCCTATTAAGTCATCAGAAAGAGAAAGCAGACATAGCTCTTCTGAAGAGGATGATGATATGTTGATTGACGATGTACAAGAATTAGTCTTGAATAGGACTTTGGAGCAGCAGATAACTACCAATGCTATAGACTCACGTTTTCTTCTGCAGTTAACAAATATTTTGTTCCATCAAGTTTCGGGTGTTACGCAGTCATATGACGAAGATAAAGAAGCACTAGCTATTGGCACAGGCAGTTCTTTTCTGTATGCGGCATTCAACATTCTCCCTCTTGAGCGAATAATGACAGTTATGGCTTATAGAACCGAGCTTGTAGCTGTGTTGTGGAATTATATGAAGCGATGCCATGAGAACCAGAAGTGGTCATCCATGCCTAGTGTCCTAGCTTATCTTCCAGCGGATTCCCCGGGTTGGCTATTACCTCTGGTTGTGTTTTGTCCTGTTTATAAGCATATGCTTACGATTGTCGATAATGAGGAATTTTACGAACGAGGAAAGCCACTATCGCTACAAGATATCAGGTTGCTCATCATCATTCTCAAGCAAGCTTTATGGCAGTTACTGTGGGTGAATCCACTTACGCAACATAACTCTGGGAAATCTGTCTCCAACGACCTCTCAAAGAAGAACCGTGTTGACTTAATTCAGAACAGGGTTGGGGTTGTAGTCGCCGAGTTACTTTCACAGTTTCAAGATTGGAACAACCGGCAACAATTCACTTCCTCGACCGACTTTCAAGCTGATACAGTCCGTGAATATTTTATCACTCAGGCTATAGTGGAAGGTACAAGAGCCAGCTACATACTGATGCAGGCTCCTTTCCTGATTCCGTTTACAAGCAGAGTCAAAATATTCACAACACAATTAGCAACGGCGAGGCAGAGTCATGGATCTGAAGAAATGTTTGCTGGAAATCGGTTTAGAATACGAAGAGATCACATCTTGGATGATGCTTACAATCAAATGAGTGCATTGTCAGAGGATGATCTCCGAGGACCAATTCGTGTGACATTTGTCAATGAACTCGGAGTTGAGGAAGCCGGTATTGATGGGGGGGGCATTTTCAAAGACTTTATGGAGAAAATTACCCTAGCAGCCTTTGATGTGCAATATGGGTTGTTTAAGGAAACCGCTGATCACATGCTTTATCCTAATCCTGGATCAGGAATGATACATGGACAGCATCTCCACTTCTTTCATTTTCTCGGCAGTCTTCTCGCAAAAGCTATGTTTGAAGGGATTCTAGTTGATATACCATTTGCAACTTTTTTCGTCAGCAAATTGAAACAAAAGTACAACTATTTGAACGATCTGCCCTCTCTGGATCCTGAGTTGTATCGGCATCTTATATTTCTGAAGCGTTATAAGGGTGATATATCAGACTTGGAGCTTTACTTTGTTATTCTGAACAATGAGTATGGAGAGAGAACAGAGGAAGAGCTACTTCCAGGGGGCAAAGACATGCGAGTCACAAATAAGAATGTTATAACTTTCATTCATCTGGTTTCCAATCATCGGTTAAACTTTCAGATACGTCAGCAGAGTTCTCATTTCTTGAGGGGGTTTCAGCAACTCATTCCGAGGGAATGGATAGACATGTTTAATGAACATGAGCTCCAGGTTCTCATATCTGGTTCAGCTGATAGTTTGGATATTGACGACTTGCGAGAGAACACCAATTATTCTGGAGGCTACAACGCTGGACATTATGTGATTGATATGTTCTGGGAAGTAATGAAAAGCTTCTCAACCGAAAACCAGAAGAAGTTCTTGAAATTTGTAACGGGTTGTTCAAGAGGACCACTGCTCGGTTTCAAGTACTTGGAACCTGCATTCTGTATACAGAGGGCTGGTGGTAGCGTGAGTAATGAAGCAGTTGATAGACTACCGACATCAGCCACTTGTATGAACCTTCTTAAGCTCCCACCCTATCAAAGTAAAGAGCAACTTGAGACCAAATTGATGTACGCCATAAGCGCAGAAGCAGGCTTTGATCTGAGCTGA

Protein:   MFFSGDPSTRKRVDLGGRSTKEGDARRLLEQTRMERNRRLLQKQHNSAALKIQKFFRGRRSMAIERFKVRRDFCETYGDNCQNVDRHCFEPASSFLPQFLFFFKAQSSGDFVMLVETCRLLRQFAHSCGDILSFFSGLDYSTEHNTVDFRVKKLAFTCIEAIHQNRERLRDQLLVTPEEATISTAILMDAMSLLLDPKLPWVCKIVSYLQKRNIFKLVREIVTTAKEGSRSPTMNGSILSLESVLFLVVPHVGREPCCCPVVDPRWSFSSMILTIPFIWQLFPNLKVVFANPSLSQHYVHQMALCIQKDTHVLPIDTNTEFPGYACLLGNTLEIANVVLSQPECSLDMAIDIASVATFLLETLPPIKSSERESRHSSSEEDDDMLIDDVQELVLNRTLEQQITTNAIDSRFLLQLTNILFHQVSGVTQSYDEDKEALAIGTGSSFLYAAFNILPLERIMTVMAYRTELVAVLWNYMKRCHENQKWSSMPSVLAYLPADSPGWLLPLVVFCPVYKHMLTIVDNEEFYERGKPLSLQDIRLLIIILKQALWQLLWVNPLTQHNSGKSVSNDLSKKNRVDLIQNRVGVVVAELLSQFQDWNNRQQFTSSTDFQADTVREYFITQAIVEGTRASYILMQAPFLIPFTSRVKIFTTQLATARQSHGSEEMFAGNRFRIRRDHILDDAYNQMSALSEDDLRGPIRVTFVNELGVEEAGIDGGGIFKDFMEKITLAAFDVQYGLFKETADHMLYPNPGSGMIHGQHLHFFHFLGSLLAKAMFEGILVDIPFATFFVSKLKQKYNYLNDLPSLDPELYRHLIFLKRYKGDISDLELYFVILNNEYGERTEEELLPGGKDMRVTNKNVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIPREWIDMFNEHELQVLISGSADSLDIDDLRENTNYSGGYNAGHYVIDMFWEVMKSFSTENQKKFLKFVTGCSRGPLLGFKYLEPAFCIQRAGGSVSNEAVDRLPTSATCMNLLKLPPYQSKEQLETKLMYAISAEAGFDLS